Sequence Similarity Clusters for the Entities in PDB 1LEG

Entity #1 | Chains: A
H-2 CLASS I HISTOCOMPATIBILITY ANTIGEN, K-B ALPHA CHAIN protein, length: 274 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 49 396
95 % 9 65 354
90 % 9 70 357
70 % 162 684 6
50 % 162 689 6
40 % 167 739 10
30 % 177 856 15
Entity #2 | Chains: B
BETA-2-MICROGLOBULIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 133 95
95 % 17 215 64 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.6
PDBFlex
90 % 17 215 68
70 % 196 875 4
50 % 201 897 4
40 % 201 897 9
30 % 201 897 14
Entity #3 | Chains: P
NADH-ubiquinone oxidoreductase MLRQ subunit protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.