Sequence Similarity Clusters for the Entities in PDB 1LDT

Entity #1 | Chains: T
TRYPSIN protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 21 33 1092
95 % 21 33 1308 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 21 33 1334
70 % 444 558 19
50 % 496 708 14
40 % 1040 1873 4
30 % 1046 1887 7
Entity #2 | Chains: L
TRYPTASE INHIBITOR protein, length: 46 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 6 13775
95 % 1 6 12990 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 6 12777
70 % 1 6 12014
50 % 1 6 10713
40 % 1 6 9659
30 % 1 6 8266

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures