Sequence Similarity Clusters for the Entities in PDB 1LDT

Entity #1 | Chains: T
TRYPSIN protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 15 23 1471
95 % 20 31 1407 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 20 31 1432
70 % 426 532 18
50 % 478 683 14
40 % 958 1695 4
30 % 1022 1845 6
Entity #2 | Chains: L
TRYPTASE INHIBITOR protein, length: 46 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 6 14275
95 % 1 6 13520 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 6 13306
70 % 1 6 12508
50 % 1 6 11158
40 % 1 6 10124
30 % 1 6 8831

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.