Sequence Similarity Clusters for the Entities in PDB 1LDT

Entity #1 | Chains: T
TRYPSIN protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 15 23 1416
95 % 20 31 1364 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 20 31 1385
70 % 420 526 19
50 % 472 677 13
40 % 948 1679 4
30 % 1012 1827 6
Entity #2 | Chains: L
TRYPTASE INHIBITOR protein, length: 46 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 13821
95 % 1 6 13096
90 % 1 6 12892
70 % 1 6 12106
50 % 1 6 10821
40 % 1 6 9825
30 % 1 6 8559

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.