Sequence Similarity Clusters for the Entities in PDB 1LDT

Entity #1 | Chains: T
TRYPSIN protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 15 23 1490
95 % 20 31 1427 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 20 31 1455
70 % 438 546 19
50 % 490 697 14
40 % 975 1719 4
30 % 1039 1869 6
Entity #2 | Chains: L
TRYPTASE INHIBITOR protein, length: 46 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 6 14495
95 % 1 6 13712 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 6 13499
70 % 1 6 12692
50 % 1 6 11322
40 % 1 6 10268
30 % 1 6 8960

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures