Sequence Similarity Clusters for the Entities in PDB 1LDS

Entity #1 | Chains: A
beta-2-microglobulin protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 168 704 2
95 % 175 719 2 Flexibility: Low
Max RMSD: 22.2, Avg RMSD: 0.9
PDBFlex
90 % 176 728 4
70 % 197 984 4
50 % 202 1008 3
40 % 202 1008 6
30 % 202 1008 9

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures