Sequence Similarity Clusters for the Entities in PDB 1LDR

Entity #1 | Chains: A
LOW-DENSITY LIPOPROTEIN RECEPTOR protein, length: 43 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 74978
95 % 1 1 52117
90 % 1 1 49412
70 % 2 2 31669
50 % 3 3 19346
40 % 6 6 10307
30 % 7 7 7578

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures