Sequence Similarity Clusters for the Entities in PDB 1LDR

Entity #1 | Chains: A
LOW-DENSITY LIPOPROTEIN RECEPTOR protein, length: 43 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 56016
95 % 1 1 45969
90 % 1 1 43711
70 % 2 2 23499
50 % 4 4 13091
40 % 9 9 6643
30 % 9 9 5811

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures