Sequence Similarity Clusters for the Entities in PDB 1LDO

Entity #1 | Chains: A,B
avidin protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 12 1939
95 % 13 25 685
90 % 14 26 678
70 % 25 39 376
50 % 29 43 409
40 % 29 43 441
30 % 174 199 77

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.