Sequence Similarity Clusters for the Entities in PDB 1LDO

Entity #1 | Chains: A,B
avidin protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 12 2068
95 % 13 25 733 Flexibility: Low
Max RMSD: 3.1, Avg RMSD: 1.2
PDBFlex
90 % 14 27 693
70 % 25 40 381
50 % 29 44 433
40 % 29 44 462
30 % 176 202 91

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.