Sequence Similarity Clusters for the Entities in PDB 1LDO

Entity #1 | Chains: A,B
avidin protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 12 1976
95 % 13 25 700
90 % 14 26 691
70 % 25 39 378
50 % 29 43 415
40 % 29 43 449
30 % 176 201 79

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.