Sequence Similarity Clusters for the Entities in PDB 1LDM

Entity #1 | Chains: A
M4 LACTATE DEHYDROGENASE protein, length: 329 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 27229
95 % 1 3 22865
90 % 1 3 22191
70 % 27 57 162
50 % 27 57 191
40 % 82 166 56
30 % 115 231 44

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures