Sequence Similarity Clusters for the Entities in PDB 1LDM

Entity #1 | Chains: A
M4 LACTATE DEHYDROGENASE protein, length: 329 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 25662
95 % 1 3 21580 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.2
PDBFlex
90 % 1 3 20976
70 % 22 52 163
50 % 22 52 191
40 % 77 160 65
30 % 105 220 39

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.