Sequence Similarity Clusters for the Entities in PDB 1LDM

Entity #1 | Chains: A
M4 LACTATE DEHYDROGENASE protein, length: 329 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 26874
95 % 1 3 22573
90 % 1 3 21916
70 % 27 57 160
50 % 27 57 189
40 % 82 166 54
30 % 112 228 42

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures