Sequence Similarity Clusters for the Entities in PDB 1LDL

Entity #1 | Chains: A
LOW-DENSITY LIPOPROTEIN RECEPTOR protein, length: 48 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 74774
95 % 1 1 51902
90 % 1 1 49207
70 % 1 1 43139
50 % 1 1 36779
40 % 1 1 32368
30 % 1 1 27358

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures