Sequence Similarity Clusters for the Entities in PDB 1LDJ

Entity #1 | Chains: A
Cullin homolog 1 protein, length: 760 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 31138
95 % 1 2 25737
90 % 1 2 24869
70 % 1 2 22591
50 % 1 2 19570
40 % 1 2 17442
30 % 1 7 5617
Entity #2 | Chains: B
ring-box protein 1 protein, length: 90 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 9 3124
95 % 4 13 3025
90 % 4 13 3067
70 % 4 13 3038
50 % 4 13 2994
40 % 4 13 2946
30 % 4 22 1947

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures