Sequence Similarity Clusters for the Entities in PDB 1LDJ

Entity #1 | Chains: A
Cullin homolog 1 protein, length: 760 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 30245
95 % 1 2 25025
90 % 1 2 24203
70 % 1 2 22051
50 % 1 2 19119
40 % 1 2 17044
30 % 1 7 5471
Entity #2 | Chains: B
ring-box protein 1 protein, length: 90 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 9 3006
95 % 4 13 2926
90 % 4 13 2971
70 % 4 13 2948
50 % 4 13 2910
40 % 4 13 2869
30 % 4 22 1896

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.