Sequence Similarity Clusters for the Entities in PDB 1LDG

Entity #1 | Chains: A
L-LACTATE DEHYDROGENASE protein, length: 316 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 36201
95 % 11 19 2330 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 0.7
PDBFlex
90 % 13 25 1267
70 % 13 25 1300
50 % 27 69 272
40 % 34 160 70
30 % 47 221 43

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures