Sequence Similarity Clusters for the Entities in PDB 1LDE

Entity #1 | Chains: A,B,C,D
LIVER ALCOHOL DEHYDROGENASE protein, length: 374 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 27 32 463
95 % 52 59 298 Flexibility: No
Max RMSD: 1.5, Avg RMSD: 0.5
PDBFlex
90 % 52 59 310
70 % 65 75 263
50 % 88 100 202
40 % 88 100 221
30 % 188 220 78

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.