Sequence Similarity Clusters for the Entities in PDB 1LDD

Entity #1 | Chains: A,B,C,D
Anaphase Promoting Complex protein, length: 74 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 25615
95 % 1 1 22729 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 1 21998
70 % 1 1 20053
50 % 1 1 14748
40 % 1 1 13154
30 % 1 1 11109

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1LDD 1 A, B, C, D Anaphase Promoting Complex RESIDUES 773-846 4932