Sequence Similarity Clusters for the Entities in PDB 1LDD

Entity #1 | Chains: A,B,C,D
Anaphase Promoting Complex protein, length: 74 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 24444
95 % 1 1 20865 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 1 20285
70 % 1 1 18633
50 % 1 1 16174
40 % 1 1 14427
30 % 1 1 12345

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures