Sequence Similarity Clusters for the Entities in PDB 1LDC

Entity #1 | Chains: A,B
L-LACTATE DEHYDROGENASE protein, length: 511 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 16651
95 % 5 9 3322 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.7
PDBFlex
90 % 5 9 3372
70 % 5 9 3333
50 % 5 9 3257
40 % 5 9 3169
30 % 5 9 2976

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.