Sequence Similarity Clusters for the Entities in PDB 1LDA

Entity #1 | Chains: A
Glycerol uptake facilitator protein protein, length: 281 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 26088
95 % 3 4 17016 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 3 4 16668
70 % 3 4 15504
50 % 3 4 13569
40 % 3 4 12162
30 % 3 4 10444

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.