Sequence Similarity Clusters for the Entities in PDB 1LD8

Entity #1 | Chains: A
protein farnesyltransferase alpha subunit protein, length: 382 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 14 3619
95 % 6 14 4366
90 % 6 56 358
70 % 6 56 395
50 % 6 56 464
40 % 6 56 499
30 % 6 56 499
Entity #2 | Chains: B
protein farnesyltransferase beta subunit protein, length: 437 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 11 5252
95 % 6 56 851
90 % 6 56 883
70 % 6 56 913
50 % 6 56 964
40 % 6 56 980
30 % 6 56 963

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.