Sequence Similarity Clusters for the Entities in PDB 1LD8

Entity #1 | Chains: A
protein farnesyltransferase alpha subunit protein, length: 382 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 14 3781
95 % 6 14 4557
90 % 6 56 372
70 % 6 56 407
50 % 6 56 488
40 % 6 56 523
30 % 6 56 522
Entity #2 | Chains: B
protein farnesyltransferase beta subunit protein, length: 437 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 11 5507
95 % 6 56 881
90 % 6 56 915
70 % 6 56 948
50 % 6 56 996
40 % 6 56 1017
30 % 6 56 990

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.