Sequence Similarity Clusters for the Entities in PDB 1LD8

Entity #1 | Chains: A
protein farnesyltransferase alpha subunit protein, length: 382 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 14 3484
95 % 6 14 4193
90 % 6 56 339
70 % 6 56 370
50 % 6 56 434
40 % 6 56 468
30 % 6 56 470
Entity #2 | Chains: B
protein farnesyltransferase beta subunit protein, length: 437 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 11 5048
95 % 6 56 791
90 % 6 56 826
70 % 6 56 868
50 % 6 56 916
40 % 6 56 937
30 % 6 56 929

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.