Sequence Similarity Clusters for the Entities in PDB 1LCT

Entity #1 | Chains: A
LACTOFERRIN protein, length: 333 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 27746
95 % 1 11 5555 Flexibility: Low
Max RMSD: 6.8, Avg RMSD: 2.4
PDBFlex
90 % 1 11 5583
70 % 1 11 5468
50 % 11 37 1179
40 % 37 116 452
30 % 37 116 460

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures