Sequence Similarity Clusters for the Entities in PDB 1LCS

Entity #1 | Chains: A,B
FELINE LEUKEMIA VIRUS RECEPTOR-BINDING DOMAIN protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 42596
95 % 1 1 32340 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 1.1
PDBFlex
90 % 1 1 30924
70 % 1 1 27606
50 % 1 1 23529
40 % 1 1 20704
30 % 2 2 13843

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures