Sequence Similarity Clusters for the Entities in PDB 1LCS

Entity #1 | Chains: A,B
FELINE LEUKEMIA VIRUS RECEPTOR-BINDING DOMAIN protein, length: 211 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41774
95 % 1 1 31764 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 1.1
PDBFlex
90 % 1 1 30394
70 % 1 1 27154
50 % 1 1 23176
40 % 1 1 20396
30 % 2 2 13629

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures