Sequence Similarity Clusters for the Entities in PDB 1LCO

Entity #1 | Chains: A,B
L-LACTATE DEHYDROGENASE protein, length: 511 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 16508
95 % 4 9 3300 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.7
PDBFlex
90 % 4 9 3349
70 % 4 9 3308
50 % 4 9 3233
40 % 4 9 3140
30 % 4 9 2951

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.