Sequence Similarity Clusters for the Entities in PDB 1LCO

Entity #1 | Chains: A,B
L-LACTATE DEHYDROGENASE protein, length: 511 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 10616
95 % 4 9 3558 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.7
PDBFlex
90 % 4 9 3634
70 % 4 9 3573
50 % 4 9 3492
40 % 4 9 3343
30 % 4 9 3089

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures