Sequence Similarity Clusters for the Entities in PDB 1LCI

Entity #1 | Chains: A
LUCIFERASE protein, length: 550 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 11 4590
95 % 6 14 3435 Flexibility: Medium
Max RMSD: 10.0, Avg RMSD: 3.3
PDBFlex
90 % 6 14 3490
70 % 7 16 3074
50 % 10 20 2479
40 % 10 20 2452
30 % 58 105 301

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures