Sequence Similarity Clusters for the Entities in PDB 1LCA

Entity #1 | Chains: A
THYMIDYLATE SYNTHASE protein, length: 316 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 21 2296
95 % 25 51 1008 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 25 51 1037
70 % 27 55 860
50 % 27 56 875
40 % 139 217 107
30 % 140 218 119

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures