Sequence Similarity Clusters for the Entities in PDB 1LCA

Entity #1 | Chains: A
THYMIDYLATE SYNTHASE protein, length: 316 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 22 47 1045
95 % 25 51 1131 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 25 51 1169
70 % 27 55 946
50 % 139 214 103
40 % 140 216 123
30 % 144 222 131

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures