Sequence Similarity Clusters for the Entities in PDB 1LBG

Entity #1 | Chains: E,F,G,H
DNA (5'-D(*GP*AP*AP*TP*TP*GP*TP*GP*AP*GP*CP*GP*CP*TP*CP*AP*CP*AP*AP*TP*T)-3') dna, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,B,C,D
PROTEIN (LACTOSE OPERON REPRESSOR) protein, length: 360 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 6 2401
95 % 11 11 1406
90 % 11 11 1434
70 % 11 11 1463
50 % 11 11 1508
40 % 11 11 1536
30 % 11 11 1507

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.