Sequence Similarity Clusters for the Entities in PDB 1LB6

Entity #1 | Chains: A
TNF receptor-associated factor 6 protein, length: 160 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 15932
95 % 1 4 14890 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.9
PDBFlex
90 % 1 4 14614
70 % 1 4 13710
50 % 1 4 12183
40 % 1 4 11042
30 % 2 27 687
Entity #2 | Chains: B
CD40 antigen protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures