Sequence Similarity Clusters for the Entities in PDB 1LB6

Entity #1 | Chains: A
TNF receptor-associated factor 6 protein, length: 160 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 16240
95 % 1 4 15149 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.9
PDBFlex
90 % 1 4 14862
70 % 1 4 13929
50 % 1 4 12362
40 % 1 4 11194
30 % 2 27 702
Entity #2 | Chains: B
CD40 antigen protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures