Sequence Similarity Clusters for the Entities in PDB 1LB5

Entity #1 | Chains: A
TNF receptor-associated factor 6 protein, length: 160 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 16217
95 % 3 4 15130 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.9
PDBFlex
90 % 3 4 14845
70 % 3 4 13915
50 % 3 4 12353
40 % 3 4 11185
30 % 11 27 700
Entity #2 | Chains: B
receptor activator of nuclear factor-kappa B protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures