Sequence Similarity Clusters for the Entities in PDB 1LB5

Entity #1 | Chains: A
TNF receptor-associated factor 6 protein, length: 160 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 14969
95 % 3 4 14056 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.9
PDBFlex
90 % 3 4 13786
70 % 3 4 12934
50 % 3 4 11529
40 % 3 4 10453
30 % 11 25 734
Entity #2 | Chains: B
receptor activator of nuclear factor-kappa B protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.