Sequence Similarity Clusters for the Entities in PDB 1LB1

Entity #1 | Chains: A,C,E,G
Guanine nucleotide exchange factor DBS protein, length: 353 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 17678
95 % 3 4 5218
90 % 3 4 5234
70 % 3 4 5164
50 % 3 4 4914
40 % 3 4 4651
30 % 5 7 3309
Entity #2 | Chains: B,D,F,H
Transforming protein RhoA protein, length: 192 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 17 1151
95 % 37 43 649
90 % 37 43 674
70 % 39 45 665
50 % 110 136 185
40 % 111 137 199
30 % 624 749 16

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.