Sequence Similarity Clusters for the Entities in PDB 1LB1

Entity #1 | Chains: A,C,E,G
Guanine nucleotide exchange factor DBS protein, length: 353 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 18306
95 % 3 4 5410
90 % 3 4 5422
70 % 3 4 5366
50 % 3 4 5089
40 % 3 4 4798
30 % 5 7 3399
Entity #2 | Chains: B,D,F,H
Transforming protein RhoA protein, length: 192 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 17 1215
95 % 37 43 679
90 % 37 43 705
70 % 39 45 703
50 % 111 137 187
40 % 112 138 202
30 % 641 772 16

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.