Sequence Similarity Clusters for the Entities in PDB 1LAU

Entity #1 | Chains: D
DNA (5'-D(*TP*TP*T)-3') dna, length: 3 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: E
PROTEIN (URACIL-DNA GLYCOSYLASE (E.C.3.2.2.-)) protein, length: 244 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 12304
95 % 2 8 6815 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 2 8 6798
70 % 2 8 6612
50 % 2 8 6134
40 % 33 71 537
30 % 34 72 533

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.