Sequence Similarity Clusters for the Entities in PDB 1LAT

Entity #1 | Chains: C,D
DNA (5'-D(*TP*TP*CP*CP*AP*GP*AP*AP*CP*AP*TP*GP*TP*TP*CP*TP*G P*GP*A)-3') dna, length: 19 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,B
GLUCOCORTICOID RECEPTOR protein, length: 82 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 45534
95 % 1 1 34001
90 % 1 2 19001
70 % 1 10 2598
50 % 4 32 858
40 % 4 35 796
30 % 4 35 786

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.