Sequence Similarity Clusters for the Entities in PDB 1LAF

Entity #1 | Chains: E
LYSINE, ARGININE, ORNITHINE-BINDING PROTEIN protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 16033
95 % 6 7 10976 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 2.0
PDBFlex
90 % 6 7 10815
70 % 7 10 6485
50 % 7 10 6041
40 % 7 10 5626
30 % 46 84 393

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures