Sequence Similarity Clusters for the Entities in PDB 1LA6

Entity #1 | Chains: A
Hemoglobin alpha-1 chain protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 7 5799
95 % 10 19 1910 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 10 19 1954
70 % 14 28 1148
50 % 272 744 4
40 % 275 749 8
30 % 652 1198 8
Entity #2 | Chains: B
Hemoglobin beta-1/2 chain protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 6 7362
95 % 3 6 7931 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 9 18 2154
70 % 12 24 1389
50 % 273 744 4
40 % 276 749 8
30 % 653 1198 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.