Sequence Similarity Clusters for the Entities in PDB 1LA6

Entity #1 | Chains: A
Hemoglobin alpha-1 chain protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 7 5891
95 % 10 19 1938 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 10 19 1983
70 % 14 28 1161
50 % 276 754 4
40 % 279 759 8
30 % 661 1214 8
Entity #2 | Chains: B
Hemoglobin beta-1/2 chain protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 6 7491
95 % 3 6 8044 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 9 18 2189
70 % 12 24 1407
50 % 277 754 4
40 % 280 759 8
30 % 662 1214 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures