Sequence Similarity Clusters for the Entities in PDB 1LA6

Entity #1 | Chains: A
Hemoglobin alpha-1 chain protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 6 7073
95 % 9 18 2013 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 9 18 2066
70 % 13 27 1146
50 % 266 730 5
40 % 269 735 9
30 % 639 1175 8
Entity #2 | Chains: B
Hemoglobin beta-1/2 chain protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 10234
95 % 2 5 10246 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 8 17 2240
70 % 11 23 1398
50 % 267 730 5
40 % 270 735 9
30 % 640 1175 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.