Sequence Similarity Clusters for the Entities in PDB 1L9M

Entity #1 | Chains: A,B
Protein-glutamine glutamyltransferase E3 protein, length: 692 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 8304
95 % 4 5 8358 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 4 5 8288
70 % 4 5 8097
50 % 4 5 7441
40 % 4 5 6844
30 % 19 26 1170

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures