Sequence Similarity Clusters for the Entities in PDB 1L9M

Entity #1 | Chains: A,B
Protein-glutamine glutamyltransferase E3 protein, length: 692 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 7159
95 % 4 5 7743 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 4 5 7688
70 % 4 5 7473
50 % 4 5 6887
40 % 4 5 6413
30 % 19 26 1114

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures