Sequence Similarity Clusters for the Entities in PDB 1L9H

Entity #1 | Chains: A,B
rhodopsin protein, length: 349 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 24 982
95 % 5 32 1067 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 1.8
PDBFlex
90 % 5 32 1080
70 % 5 32 1127
50 % 5 32 1166
40 % 5 32 1183
30 % 5 32 1158

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.