Sequence Similarity Clusters for the Entities in PDB 1L9H

Entity #1 | Chains: A,B
rhodopsin protein, length: 349 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 24 1023
95 % 5 32 1099 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 1.8
PDBFlex
90 % 5 32 1117
70 % 5 32 1162
50 % 5 32 1200
40 % 5 32 1216
30 % 5 32 1188

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.