Sequence Similarity Clusters for the Entities in PDB 1L9B

Entity #1 | Chains: L
REACTION CENTER PROTEIN L CHAIN protein, length: 281 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 31 68 405
95 % 39 97 334
90 % 39 97 360
70 % 39 97 398
50 % 54 126 327
40 % 54 126 353
30 % 54 126 362
Entity #2 | Chains: M
REACTION CENTER PROTEIN M CHAIN protein, length: 307 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 62 457
95 % 39 97 333
90 % 39 97 359
70 % 39 97 396
50 % 54 126 326
40 % 54 126 351
30 % 54 126 360
Entity #3 | Chains: H
REACTION CENTER PROTEIN H CHAIN protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 39 96 241
95 % 39 97 335
90 % 39 97 361
70 % 39 97 399
50 % 39 97 467
40 % 54 126 354
30 % 54 126 363
Entity #4 | Chains: C
cytochrome c-2 protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 5 10229
95 % 4 5 10236
90 % 4 5 10097
70 % 4 5 9571
50 % 6 7 5620
40 % 97 154 177
30 % 97 154 191

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.