Sequence Similarity Clusters for the Entities in PDB 1L9A

Entity #1 | Chains: B
signal recognition particle RNA S domain rna, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
SIGNAL RECOGNITION PARTICLE 19 KDA PROTEIN protein, length: 87 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 66498
95 % 5 5 10069
90 % 5 5 9948
70 % 5 5 9432
50 % 5 5 8583
40 % 5 5 7852
30 % 5 5 6929

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.