Sequence Similarity Clusters for the Entities in PDB 1L9A

Entity #1 | Chains: B
signal recognition particle RNA S domain rna, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
SIGNAL RECOGNITION PARTICLE 19 KDA PROTEIN protein, length: 87 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 72983
95 % 5 5 11241
90 % 5 5 11097
70 % 5 5 10521
50 % 5 5 9515
40 % 5 5 8695
30 % 5 5 7647

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures