Sequence Similarity Clusters for the Entities in PDB 1L8D

Entity #1 | Chains: A,B
DNA double-strand break repair rad50 ATPase protein, length: 112 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 46346
95 % 1 1 34704 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 1 33168
70 % 1 1 29514
50 % 1 1 25184
40 % 1 1 22187
30 % 1 1 18787

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.