POP-OUT | CLOSE

An Information Portal to 110071 Biological Macromolecular Structures

STRUCTURAL BASIS FOR HIF-1ALPHA/CBP RECOGNITION IN THE CELLULAR HYPOXIC RESPONSE
Sequence Clustering and Redundancy Reduction Results
1L8C
Sequence Clusters for the Sequence Entities in PDB 1L8C
Entity #1: Chains: A - CREB-binding protein protein, length: 95 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 4 4 18980
95% 5 5 11879
90% 6 7 8453
70% 6 7 8066
50% 6 7 7362
40% 6 7 6791
30% 11 13 3453
Entity #2: Chains: B - Hypoxia-inducible factor 1 alpha protein, length: 51 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 2 39349
95% 2 2 29560
90% 2 2 28380
70% 2 2 25495
50% 2 2 21994
40% 2 2 19530
30% 2 2 16638
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.