Sequence Similarity Clusters for the Entities in PDB 1L8C

Entity #1 | Chains: A
CREB-binding protein protein, length: 95 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 5 16882
95 % 5 5 15651
90 % 6 7 11229
70 % 6 7 10642
50 % 6 7 9571
40 % 11 13 4768
30 % 11 13 4461
Entity #2 | Chains: B
Hypoxia-inducible factor 1 alpha protein, length: 51 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 40326
95 % 2 2 34037
90 % 2 2 32535
70 % 2 2 29015
50 % 2 2 24788
40 % 2 2 21793
30 % 2 2 18200

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures