Sequence Similarity Clusters for the Entities in PDB 1L8C

Entity #1 | Chains: A
CREB-binding protein protein, length: 95 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 5 16461
95 % 5 5 15285
90 % 6 7 11005
70 % 6 7 10401
50 % 6 7 9355
40 % 11 13 4651
30 % 11 13 4360
Entity #2 | Chains: B
Hypoxia-inducible factor 1 alpha protein, length: 51 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 39519
95 % 2 2 33376
90 % 2 2 31942
70 % 2 2 28530
50 % 2 2 24389
40 % 2 2 21455
30 % 2 2 17899

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures