Sequence Similarity Clusters for the Entities in PDB 1L8C

Entity #1 | Chains: A
CREB-binding protein protein, length: 95 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 5 17042
95 % 5 5 15810
90 % 6 7 11378
70 % 6 7 10763
50 % 6 7 9660
40 % 11 13 4846
30 % 11 13 4534
Entity #2 | Chains: B
Hypoxia-inducible factor 1 alpha protein, length: 51 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 41189
95 % 2 2 34750
90 % 2 2 33193
70 % 2 2 29560
50 % 2 2 25276
40 % 2 2 22232
30 % 2 2 18565

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures