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STRUCTURAL BASIS FOR HIF-1ALPHA/CBP RECOGNITION IN THE CELLULAR HYPOXIC RESPONSE
Sequence Clustering and Redundancy Reduction Results
1L8C
Sequence Clusters for the Sequence Entities in PDB 1L8C
Entity #1: Chains: A - CREB-binding protein protein, length: 95 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 4 4 17887
95% 5 5 11270
90% 6 7 8004
70% 6 7 7661
50% 6 7 7012
40% 6 7 6462
30% 9 11 3852
Entity #2: Chains: B - Hypoxia-inducible factor 1 alpha protein, length: 51 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 2 37032
95% 2 2 27910
90% 2 2 26845
70% 2 2 24229
50% 2 2 20964
40% 2 2 18631
30% 2 2 15878
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.