Sequence Similarity Clusters for the Entities in PDB 1L8C

Entity #1 | Chains: A
CREB-binding protein protein, length: 95 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 24478
95 % 5 5 15261
90 % 6 7 10869
70 % 6 7 10314
50 % 6 7 9334
40 % 6 7 8536
30 % 11 13 4346
Entity #2 | Chains: B
Hypoxia-inducible factor 1 alpha protein, length: 51 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 49835
95 % 2 2 37199
90 % 2 2 35497
70 % 2 2 31537
50 % 2 2 26952
40 % 2 2 23794
30 % 2 2 20192

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures