Sequence Similarity Clusters for the Entities in PDB 1L8B

Entity #1 | Chains: A,B
EUKARYOTIC TRANSLATION INITIATION FACTOR 4E protein, length: 190 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 15 832
95 % 11 22 920 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.1
PDBFlex
90 % 11 22 952
70 % 11 22 980
50 % 14 35 683
40 % 14 40 569
30 % 16 48 500

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures