Sequence Similarity Clusters for the Entities in PDB 1L7I

Entity #1 | Chains: L
chimera of Fab2C4: "humanized" murine monoclonal antibody protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 28817
95 % 24 210 56 Flexibility: Low
Max RMSD: 6.5, Avg RMSD: 2.2
PDBFlex
90 % 92 791 2
70 % 282 2479 1
50 % 581 5021 1
40 % 581 5021 1
30 % 660 5951 1
Entity #2 | Chains: H
chimera of Fab2C4: "humanized" murine monoclonal antibody protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 15911
95 % 1 4 8076 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 2.8
PDBFlex
90 % 1 4 8017
70 % 283 2429 2
50 % 582 5021 1
40 % 582 5021 1
30 % 661 5951 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures