Sequence Similarity Clusters for the Entities in PDB 1L7I

Entity #1 | Chains: L
chimera of Fab2C4: "humanized" murine monoclonal antibody protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 28416
95 % 21 192 62 Flexibility: Low
Max RMSD: 6.5, Avg RMSD: 2.2
PDBFlex
90 % 84 763 2
70 % 270 2426 1
50 % 556 4913 1
40 % 556 4913 1
30 % 601 5780 1
Entity #2 | Chains: H
chimera of Fab2C4: "humanized" murine monoclonal antibody protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 15639
95 % 1 4 7950 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 2.8
PDBFlex
90 % 1 4 7895
70 % 271 2376 2
50 % 557 4913 1
40 % 557 4913 1
30 % 602 5780 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures