Sequence Similarity Clusters for the Entities in PDB 1L7I

Entity #1 | Chains: L
chimera of Fab2C4: "humanized" murine monoclonal antibody protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 26718
95 % 24 188 66 Flexibility: Low
Max RMSD: 7.7, Avg RMSD: 2.3
PDBFlex
90 % 96 778 2
70 % 285 2538 1
50 % 589 5152 1
40 % 733 5806 1
30 % 911 7240 1
Entity #2 | Chains: H
chimera of Fab2C4: "humanized" murine monoclonal antibody protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 16202
95 % 1 4 8315 Flexibility: Low
Max RMSD: 5.3, Avg RMSD: 2.2
PDBFlex
90 % 1 4 8245
70 % 287 2497 2
50 % 590 5152 1
40 % 734 5806 1
30 % 912 7240 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures