Sequence Similarity Clusters for the Entities in PDB 1L7I

Entity #1 | Chains: L
chimera of Fab2C4: "humanized" murine monoclonal antibody protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 27911
95 % 14 171 68 Flexibility: Low
Max RMSD: 6.5, Avg RMSD: 2.2
PDBFlex
90 % 74 729 3
70 % 255 2362 1
50 % 526 4781 1
40 % 526 4781 1
30 % 568 5635 1
Entity #2 | Chains: H
chimera of Fab2C4: "humanized" murine monoclonal antibody protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 15340
95 % 1 4 7817 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 2.8
PDBFlex
90 % 1 4 7765
70 % 256 2311 2
50 % 527 4781 1
40 % 527 4781 1
30 % 569 5635 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures