Sequence Similarity Clusters for the Entities in PDB 1L7E

Entity #1 | Chains: A,B,C,D
nicotinamide nucleotide Transhydrogenase, subunit alpha 1 protein, length: 384 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 11 1294
95 % 3 15 1347 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.0
PDBFlex
90 % 3 15 1370
70 % 3 15 1385
50 % 3 16 1367
40 % 8 26 947
30 % 15 38 560

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures