Sequence Similarity Clusters for the Entities in PDB 1L7D

Entity #1 | Chains: A,B,C,D
nicotinamide nucleotide Transhydrogenase, subunit alpha 1 protein, length: 384 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 11 1266
95 % 1 15 1315 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.0
PDBFlex
90 % 1 15 1340
70 % 1 15 1357
50 % 1 16 1335
40 % 4 26 932
30 % 4 38 555

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.