Sequence Similarity Clusters for the Entities in PDB 1L6X

Entity #1 | Chains: A
IMMUNOGLOBULIN GAMMA-1 HEAVY CHAIN CONSTANT REGION protein, length: 207 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 19 1104
95 % 2 165 114 Flexibility: Low
Max RMSD: 5.2, Avg RMSD: 1.4
PDBFlex
90 % 3 174 109
70 % 3 175 121
50 % 4 186 139
40 % 4 186 153
30 % 547 7175 1
Entity #2 | Chains: B
Minimized B-domain of Protein A Z34C protein, length: 34 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 8 4624
95 % 1 8 4925 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 1 8 4961
70 % 1 8 4824
50 % 1 9 4328
40 % 1 9 4035
30 % 1 9 3666

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures