Sequence Similarity Clusters for the Entities in PDB 1L6X

Entity #1 | Chains: A
IMMUNOGLOBULIN GAMMA-1 HEAVY CHAIN CONSTANT REGION protein, length: 207 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 28 537
95 % 2 160 95 Flexibility: Low
Max RMSD: 5.2, Avg RMSD: 1.4
PDBFlex
90 % 3 169 89
70 % 3 170 106
50 % 4 179 140
40 % 4 179 152
30 % 349 5635 1
Entity #2 | Chains: B
Minimized B-domain of Protein A Z34C protein, length: 34 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 8 4215
95 % 1 8 4989 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 1 8 5005
70 % 1 8 4892
50 % 1 9 4325
40 % 1 9 4128
30 % 1 9 3809

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures