Sequence Similarity Clusters for the Entities in PDB 1L6O

Entity #1 | Chains: A,B,C
Segment polarity protein dishevelled homolog DVL-2 protein, length: 95 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 10874
95 % 4 4 7404 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.4
PDBFlex
90 % 4 4 7352
70 % 4 7 5178
50 % 4 7 4953
40 % 109 189 159
30 % 165 300 111
Entity #2 | Chains: D,E,F
Dapper 1 protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures