Sequence Similarity Clusters for the Entities in PDB 1L6M

Entity #1 | Chains: A,B,C
Neutrophil gelatinase-associated lipocalin protein, length: 180 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 15 21 543
95 % 20 36 362 Flexibility: No
Max RMSD: 1.3, Avg RMSD: 0.5
PDBFlex
90 % 27 45 321
70 % 32 51 313
50 % 33 54 366
40 % 33 54 394
30 % 56 86 265

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures