Sequence Similarity Clusters for the Entities in PDB 1L5R

Entity #1 | Chains: A,B
glycogen phosphorylase, liver form protein, length: 847 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 17 1273
95 % 8 18 1603 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 0.6
PDBFlex
90 % 8 18 1634
70 % 180 215 144
50 % 180 215 178
40 % 192 232 164
30 % 192 232 178

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures