Sequence Similarity Clusters for the Entities in PDB 1L5H

Entity #1 | Chains: A
nitrogenase molybdenum-iron protein alpha chain protein, length: 491 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 12 1298
95 % 23 27 769 Flexibility: No
Max RMSD: 2.6, Avg RMSD: 0.4
PDBFlex
90 % 23 27 793
70 % 29 33 681
50 % 29 33 736
40 % 29 33 766
30 % 35 41 606
Entity #2 | Chains: B
nitrogenase molybdenum-iron protein beta chain protein, length: 522 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 23 27 623
95 % 23 27 762 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 23 27 787
70 % 23 27 835
50 % 29 33 732
40 % 29 33 761
30 % 29 33 767

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures