Sequence Similarity Clusters for the Entities in PDB 1L5H

Entity #1 | Chains: A
nitrogenase molybdenum-iron protein alpha chain protein, length: 491 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 16 835
95 % 21 25 781 Flexibility: No
Max RMSD: 2.6, Avg RMSD: 0.4
PDBFlex
90 % 21 25 809
70 % 27 31 685
50 % 27 31 739
40 % 27 31 771
30 % 28 33 689
Entity #2 | Chains: B
nitrogenase molybdenum-iron protein beta chain protein, length: 522 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 19 23 700
95 % 21 25 780 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 21 25 808
70 % 21 25 852
50 % 27 31 737
40 % 27 31 770
30 % 27 31 762

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.