Sequence Similarity Clusters for the Entities in PDB 1L5G

Entity #1 | Chains: A
INTEGRIN ALPHA V protein, length: 957 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 11 5703
95 % 8 14 4675 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.3
PDBFlex
90 % 8 14 4698
70 % 8 14 4600
50 % 8 14 4409
40 % 8 14 4201
30 % 9 16 3275
Entity #2 | Chains: B
INTEGRIN BETA-3 protein, length: 692 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 16956
95 % 9 16 3759
90 % 9 16 3810
70 % 9 16 3757
50 % 9 16 3645
40 % 11 22 1779
30 % 11 22 1736
Entity #3 | Chains: C
CYCLIC ARG-GLY-ASP PEPTIDE protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures