Sequence Similarity Clusters for the Entities in PDB 1L4Z

Entity #1 | Chains: A
Plasminogen protein, length: 248 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 9236
95 % 10 10 3429 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 1.5
PDBFlex
90 % 10 10 3481
70 % 10 10 3437
50 % 10 10 3349
40 % 1763 1863 4
30 % 1779 1885 6
Entity #2 | Chains: B
Streptokinase protein, length: 136 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 68152
95 % 1 1 46942
90 % 1 1 44465
70 % 1 1 39007
50 % 1 1 33181
40 % 1 1 29288
30 % 1 1 24818

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures