Sequence Similarity Clusters for the Entities in PDB 1L4Z

Entity #1 | Chains: A
Plasminogen protein, length: 248 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 9055
95 % 10 10 3381 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 1.5
PDBFlex
90 % 10 10 3426
70 % 10 10 3386
50 % 10 10 3294
40 % 1632 1720 4
30 % 1768 1870 6
Entity #2 | Chains: B
Streptokinase protein, length: 136 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 67288
95 % 1 1 46382
90 % 1 1 43954
70 % 1 1 38572
50 % 1 1 32819
40 % 1 1 28964
30 % 1 1 24543

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures