Sequence Similarity Clusters for the Entities in PDB 1L4Z

Entity #1 | Chains: A
Plasminogen protein, length: 248 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 8873
95 % 10 10 3294 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 1.5
PDBFlex
90 % 10 10 3340
70 % 10 10 3303
50 % 10 10 3219
40 % 1608 1696 4
30 % 1744 1846 6
Entity #2 | Chains: B
Streptokinase protein, length: 136 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 66077
95 % 1 1 45603
90 % 1 1 43257
70 % 1 1 37984
50 % 1 1 32340
40 % 1 1 28555
30 % 1 1 24213

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.