Sequence Similarity Clusters for the Entities in PDB 1L3R

Entity #1 | Chains: E
CAMP-DEPENDENT PROTEIN KINASE, ALPHA-CATALYTIC SUBUNIT protein, length: 350 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 28 67 515
95 % 143 253 123 Flexibility: Low
Max RMSD: 4.6, Avg RMSD: 0.9
PDBFlex
90 % 143 254 126
70 % 143 254 146
50 % 143 254 173
40 % 172 340 132
30 % 1548 4337 2
Entity #2 | Chains: I
CAMP-DEPENDENT PROTEIN KINASE INHIBITOR, MUSCLE/BRAIN FORM protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 89 161 179
95 % 89 161 222 Flexibility: No
Max RMSD: 1.1, Avg RMSD: 0.5
PDBFlex
90 % 89 161 232
70 % 89 161 253
50 % 89 161 280
40 % 89 161 311
30 % 89 161 321

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures