Sequence Similarity Clusters for the Entities in PDB 1L3J

Entity #1 | Chains: A
YVRK PROTEIN protein, length: 385 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 7 10974
95 % 6 12 3938 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 6 12 3999
70 % 6 12 3918
50 % 6 12 3815
40 % 6 12 3629
30 % 6 12 3323

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures