Sequence Similarity Clusters for the Entities in PDB 1L3J

Entity #1 | Chains: A
YVRK PROTEIN protein, length: 385 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 11621
95 % 6 12 3663 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 6 12 3713
70 % 6 12 3669
50 % 6 12 3570
40 % 6 12 3448
30 % 6 12 3221

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.