Sequence Similarity Clusters for the Entities in PDB 1L3E

Entity #1 | Chains: A
hypoxia inducible factor-1 alpha subunit protein, length: 42 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 23297
95 % 4 4 19879
90 % 4 4 19340
70 % 4 4 17846
50 % 4 4 15570
40 % 4 4 13904
30 % 4 4 11918
Entity #2 | Chains: B
p300 protein protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 44721
95 % 2 2 33429
90 % 7 7 10078
70 % 7 7 9562
50 % 7 7 8693
40 % 7 7 7955
30 % 12 13 4041

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.