Sequence Similarity Clusters for the Entities in PDB 1L3E

Entity #1 | Chains: A
hypoxia inducible factor-1 alpha subunit protein, length: 42 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 21412
95 % 4 4 18361
90 % 4 4 17870
70 % 4 4 16510
50 % 4 4 14441
40 % 4 4 12950
30 % 4 4 11124
Entity #2 | Chains: B
p300 protein protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 41186
95 % 2 2 30822
90 % 7 7 9244
70 % 7 7 8782
50 % 7 7 8012
40 % 7 7 7374
30 % 12 13 3753

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.