Sequence Similarity Clusters for the Entities in PDB 1L3E

Entity #1 | Chains: A
hypoxia inducible factor-1 alpha subunit protein, length: 42 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 20797
95 % 4 4 17874
90 % 4 4 17384
70 % 4 4 16064
50 % 4 4 14061
40 % 4 4 12600
30 % 4 4 10836
Entity #2 | Chains: B
p300 protein protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 40072
95 % 2 2 30011
90 % 7 7 8956
70 % 7 7 8521
50 % 7 7 7773
40 % 7 7 7157
30 % 12 13 3647

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.