Sequence Similarity Clusters for the Entities in PDB 1L3E

Entity #1 | Chains: A
hypoxia inducible factor-1 alpha subunit protein, length: 42 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 21704
95 % 4 4 18588
90 % 4 4 18085
70 % 4 4 16720
50 % 4 4 14612
40 % 4 4 13092
30 % 4 4 11252
Entity #2 | Chains: B
p300 protein protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 41702
95 % 2 2 31182
90 % 7 7 9388
70 % 7 7 8914
50 % 7 7 8131
40 % 7 7 7474
30 % 12 13 3800

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.