Sequence Similarity Clusters for the Entities in PDB 1L3E

Entity #1 | Chains: A
hypoxia inducible factor-1 alpha subunit protein, length: 42 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 24012
95 % 4 4 20479
90 % 4 4 19911
70 % 4 4 18342
50 % 4 4 15956
40 % 4 4 14245
30 % 4 4 12198
Entity #2 | Chains: B
p300 protein protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 46005
95 % 2 2 34405
90 % 7 7 10426
70 % 7 7 9876
50 % 7 7 8945
40 % 7 7 8191
30 % 12 13 4163

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.