Sequence Similarity Clusters for the Entities in PDB 1L3E

Entity #1 | Chains: A
hypoxia inducible factor-1 alpha subunit protein, length: 42 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 21277
95 % 4 4 18254
90 % 4 4 17762
70 % 4 4 16408
50 % 4 4 14357
40 % 4 4 12873
30 % 4 4 11069
Entity #2 | Chains: B
p300 protein protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 40948
95 % 2 2 30649
90 % 7 7 9165
70 % 7 7 8714
50 % 7 7 7956
40 % 7 7 7325
30 % 12 13 3728

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.