Sequence Similarity Clusters for the Entities in PDB 1L2O

Entity #1 | Chains: A
MYOSIN HEAVY CHAIN protein, length: 835 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 14 3431
95 % 6 14 4210 Flexibility: High
Max RMSD: 28.6, Avg RMSD: 13.9
PDBFlex
90 % 6 17 3329
70 % 8 21 2688
50 % 15 50 439
40 % 60 101 280
30 % 82 126 234
Entity #2 | Chains: B
MYOSIN REGULATORY LIGHT CHAIN protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 18 2603
95 % 10 18 3247 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 1.3
PDBFlex
90 % 10 18 3296
70 % 13 24 2103
50 % 16 47 503
40 % 188 336 34
30 % 208 363 47
Entity #3 | Chains: C
MYOSIN ESSENTIAL LIGHT CHAIN protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 17 2823
95 % 13 24 2055 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.7
PDBFlex
90 % 13 24 2106
70 % 13 24 2106
50 % 15 28 1801
40 % 189 336 34
30 % 209 363 47

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.