Sequence Similarity Clusters for the Entities in PDB 1L2J

Entity #1 | Chains: A,B
ESTROGEN RECEPTOR BETA protein, length: 271 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 38922
95 % 31 32 791 Flexibility: Low
Max RMSD: 5.8, Avg RMSD: 1.8
PDBFlex
90 % 35 36 751
70 % 35 36 800
50 % 303 306 42
40 % 303 306 57
30 % 993 1019 10

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures