Sequence Similarity Clusters for the Entities in PDB 1L2J

Entity #1 | Chains: A,B
ESTROGEN RECEPTOR BETA protein, length: 271 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 38168
95 % 31 32 782 Flexibility: Low
Max RMSD: 5.8, Avg RMSD: 1.8
PDBFlex
90 % 35 36 744
70 % 35 36 786
50 % 300 301 41
40 % 300 301 53
30 % 980 1004 10

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures